PolygonStats2D_timeBased

Doc: Time series of counts particles inside given 2D polygons The particles counted can be subsetted by status, water depth etc, default is all alive particles not outside open boundaries. Alive particles have stationary, no_bottom, stranded or moving status Output in netcdf file split into release groups has at least -counts of particles in the requested subset -counts of all alive particles inside the domain, whether in the subset or not

short class_name: PolygonStats2D_timeBased

full class_name : oceantracker.particle_statistics.polygon_statistics.PolygonStats2D_timeBased

Warning

Class is under development may not yet work in all cases, if errors contact developer

Inheritance: > ParameterBaseClass> _BaseParticleLocationStats> _BasePolygonStats> _BaseTimeStats> PolygonStats2D_timeBased

Parameters:

  • class_name<class 'str'> <optional>

    Description: Class name as string A.B.C, used to import this class from python path

    • default: None

    • data_type: <class 'str'>

  • duration<class 'float'> <optional>

    Description: How long to do counting after start time, can be used instead of “end” parameter

    • default: None

    • data_type: <class 'float'>

    • units: sec

    • min: 0.0

  • end['str', 'float', 'datetime64', 'int', 'float64', 'float32'] <optional>

    Description: Stop particle counting from this iso date-time, default is end of model run

    • default: None

    • possible_types: [<class 'str'>, <class 'float'>, <class 'numpy.datetime64'>, <class 'int'>, <class 'numpy.float64'>, <class 'numpy.float32'>]

    • units: ISO8601  date as string eg. "2017-01-01T00:30:00",np.datetime64, or float of seconds since 1/1/1970

  • name<class 'str'> <optional>

    Description: Name used to refer to class in code and output, = None for core claseses

    • default: None

    • data_type: <class 'str'>

  • near_seabed<class 'float'> <optional>

    Description: Count only those particles within this distance of bottom

    • default: None

    • data_type: <class 'float'>

    • units: meters above seabed

    • min: 0.001

  • near_seasurface<class 'float'> <optional>

    Description: Count only those particles within this distance of tidal sea surface

    • default: None

    • data_type: <class 'float'>

    • units: meters below sea surface

    • min: 0.001

  • particle_property_list: <optional>

    Description: - Create statistics for these named particle properties, list = [“water_depth”], for average of water depth at particle locations inside the counted regions

    • a list containing type: []

    • default list : None

    • data_type: <class 'str'>

    • possible_types: []

    • make_list_unique: True

    • min_len: 0

  • role_output_file_tag<class 'str'> <optional>
    • default: stats_polygon_time

    • data_type: <class 'str'>

  • start['str', 'float', 'datetime64', 'int', 'float64', 'float32'] <optional>

    Description: Start particle counting from this date-time, default is start of model run

    • default: None

    • possible_types: [<class 'str'>, <class 'float'>, <class 'numpy.datetime64'>, <class 'int'>, <class 'numpy.float64'>, <class 'numpy.float32'>]

    • units: ISO8601  date as string eg. "2017-01-01T00:30:00",np.datetime64, or float of seconds since 1/1/1970

  • status_list: <optional>

    Description: - List of particle status types to count,eg [“on_bottom”,”moving”], other status types will be ignored in statistcs

    • a list containing type: []

    • default list : ['stationary', 'stranded_by_tide', 'on_bottom', 'moving']

    • data_type: <class 'str'>

    • possible_values: ['unknown', 'notReleased', 'dead', 'outside_domain', 'outside_open_boundary', 'stationary', 'stranded_by_tide', 'on_bottom', 'moving']

    • possible_types: []

    • make_list_unique: False

    • min_len: 0

  • update_interval<class 'float'> <optional>

    Description: Time in seconds between calculating statistics, wil be rounded to be a multiple of the particle tracking time step

    • default: 3600.0

    • data_type: <class 'float'>

    • units: sec

  • use_release_group_polygons<class 'bool'> <optional>

    Description: Omit polygon_list param and use all polygon release polygons as statistics/counting polygons, useful for building release group polygon to polygon connectivity matrix.

    • default: False

    • data_type: <class 'bool'>

    • possible_values: [True, False]

  • user_note<class 'str'> <optional>
    • default: None

    • data_type: <class 'str'>

  • water_depth_max<class 'float'> <optional>

    Description: Count only those particles in water depths less than this value

    • default: None

    • data_type: <class 'float'>

    • min: 0.0

  • water_depth_min<class 'float'> <optional>

    Description: Count only those particles in water depths greater than this value

    • default: None

    • data_type: <class 'float'>

    • min: 0.0

  • write<class 'bool'> <optional>

    Description: Write statistcs to disk

    • default: True

    • data_type: <class 'bool'>

    • possible_values: [True, False]

  • z_max<class 'float'> <optional>

    Description: Count only those particles with vertical position <= to this value

    • default: None

    • data_type: <class 'float'>

    • units: meters above mean water level, so is < 0 at depth

  • z_min<class 'float'> <optional>

    Description: Count only those particles with vertical position >= to this value

    • default: None

    • data_type: <class 'float'>

    • units: meters above mean water level, so is < 0 at depth

Expert Parameters: